No problem, like I said it's tricky starting out. Part of programming is figuring out these kinds of things. Eventually I promise you it will just 'click', until the next stage of learning!
The best way I can describe of when you increment (i++) is when you have completed all the tasks for the current loop cycle. If you have if-statements that do something based on the current cycle you can increment after all of those if statements, but this is problem specific of course.
For example, if you have a loop:
for(int i = 0; i < 100; i++) {
if(i % 2 == 0) {
print("Even");
} else {
print("Odd");
}
i++;
}
You only need to increment at the end of the if statements, since you are done with what you are checking at each cycle. You would not have to put i++ in every if statement (in this case).