There are a bunch of ways to do VLANs in Proxmox.
First off you need to decide if your Proxmox host needs to be on the VLAN. If it doesn't, just tag the VLAN in the interface on the VM config. Otherwise, here are is a working example:
auto lo
iface lo inet loopback
iface eth0 inet manual
iface eth1 inet manual
auto vmbr0
iface vmbr0 inet static
address 10.0.1.30
netmask 255.255.255.0
gateway 10.0.1.1
bridge_ports eth0
bridge_stp off
bridge_fd 0
#VM Network
auto bond0.5
iface bond0.5 inet manual
vlan-raw-device eth0
auto bond0.55
iface bond0.55 inet manual
vlan-raw-device eth0
auto vmbr1
iface vmbr1 inet static
address 10.100.1.30
netmask 255.255.255.0
bridge_ports eth0.5
bridge_stp off
bridge_fd 0
#Storage Network, VLAN 5
So here you have two options.
From this, you could do the same thing with your second network interface.