Very few.

Here's my list.

7-zip (POSIX) - 4.57-3p Anemone - 0.1~nightly-165 AppInfo - 1.6.2 AppList - 1.5.9 APR (/usr/lib) - 1.3.3-2 APT 0.6 Transitional - 1:0-23 APT 0.7 (apt-key) - 0.7.25.3-3 APT 0.7 Strict - 0.7.25.3-8 APT 0.7 Strict (lib) - 0.7.25.3-13 Base Structure - 1-4 BaSic-AdBlocker8 - 1.0.6-1 Berkeley DB - 4.6.21-4p BetterRotate iPad - 1.0-1 BigBoss Icon Set - 1.0 Bourne-Again SHell - 4.0.44-15 BytaFont 2 - 2.5.6 bzip2 - 1.0.5-7 CCSettings for iOS 8 - 0.0.6-113 Cloaky - 2.2.1-1 Core Utilities (/bin) - 8.12-7p Cydia Installer - 1.1.18 Cydia Substrate - 0.9.5101 Cydia Timeout 6 - 1.0 Cydia Translations - 1.1.12 Darwin Tools - 1-4 Debian Packager - 1.14.25-9 Debian Utilities - 3.3.3ubuntu1-1p Diff Utilities - 2.8.1-6 Dimmer - 1.8.1.1 Fenrir Repo Icons - 1.0.1 Filza File Manager - 1.5-211 Find Utilities - 4.2.33-6 Flex 2 - 1.962 Geo Sans Light Font - 1.2 Glober iOS8 - 1.0 GNU Privacy Guard - 1.4.8-4 grep - 2.5.4-3 gzip - 1.6-7 HideMe8 (iOS 8) - 1.0.2-1 Hoenir Repo Icons - 1.0 iBlank for iOS 7 and iOS8 - 5.1 iCleaner Pro - 7.4.3 Icon Renamer - 1.2.1 IconBundles - 0.2-1 IconOmatic - 1.2 IconSupport - 1.9.4-3 iOS Firmware - 8.3 iPad - 1 iPhone Firmware (/sbin) - 0-1 iWidgets - 1.2.3 Kvasir Repo Files - 1.0 libhide - 2.4.1-1 Link Identity Editor - 1:1.2.0 LockHTML4 - 1.0.3-1 LockScreenGestureCleanUp - 0.5-1 LS Folium - 1.1 LZMA Utils - 4.32.7-4 MessagesCustomiser - 3.0~beta2 Mobius - 1.2.4 NCMemo (iOS 8) - 1.0.0-12 NCWeather - 2.0.1 Neutraface iOS8 - 1.2 New Curses - 5.7-13 NoRespringChirp - 0.2 PAM (Apple) - 32.1-3 PAM Modules - 36.1-4 Patcyh - 1.0.0 pcre - 8.30-5p pincrush - 0.9.2-1 Platinum - 1.1.1-1 PreferenceLoader - 2.2.2 Profile Directory - 0-2 Raleway Light Font - 1.1 readline - 6.0-7 Repo Icons - 1.0 RocketBootstrap - 1.0.2 sed - 4.1.5-7 shell-cmds - 118-6 StatusVol 2 - 0.7-5 Substrate Safe Mode - 0.9.5000 SwipeExpander - 1.0.5-1 SwipeSelection Pro - 0.9.6-1 SwitchClose8 - 1.0-4 system-cmds - 433.4-12 TaiG 8.1.3-8.x Untether - 2.1.3 Tape Archive - 1.19-8 Tesla Font - 1.0 UIKit Tools - 1.1.10 unrar - 3.6.8-2p unzip - 5.52-5p WeeLoader - 1.4-3 WinterBoard - 0.9.3918 zip - 2.32-5p